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IPEN Adolescent Accelerometer
Data Collection Training
Kelli L. Cain, M.A.
Project Manager, Accelerometer Coordinator
IPEN Coordinating Center
University of California San Diego
Kelli L. Cain, San Diego May 2014
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Strany 1 - Data Collection Training

IPEN Adolescent Accelerometer Data Collection Training Kelli L. Cain, M.A. Project Manager, Accelerometer Coordinator IPEN Coordinating Center Univer

Strany 2 - Overview

IPEN Adolescent Accelerometer Data Collection Guidelines  Accelerometer Wearing and School Times Log:  Participant completes  ‘Due dates’ may help

Strany 3 - Coordinating Center Roles

 Downloading Data  Screening Data  Electronic Tracking  Data Transfer  Quality Control  Data Scoring for your own country PART 3: POST-DATA C

Strany 4 - Tracking

Data Scoring Kelli L. Cain, San Diego May 2014

Strany 5 - Accelerometer Model:

Program Non-wearing time within valid days is coded as such during this cleaning process. We use -999. Select level of output: Summary, Daily, Hourly,

Strany 6 -  Filter:

Saving wear time You select the days to be scored. We recommend saving ALL wearing time. DO NOT save “drop-off” or “pick-up” day. Kelli L. Cain, San

Strany 7 -  Epoch:

Pointers  Scan, take a snapshot of a day (don’t get caught up in the minutes, step back and look at the day as a whole)  Trust your judgment and if

Strany 8 - Nonwear definition:

Combining re-wear files  Clean each wear file and save wear days  Open each MPD file in Notepad  Copy data from 2nd wearing to end of 1st wearing f

Strany 9 - 66% to 86%!

Scoring Data (MPD files)  There are a few things to configure in MeterPlus before batch scoring your files  Cut-points  Filename variables  Energy

Strany 10 - Accelerometer Wearing and

Programming cut-points (Tools/Options) Create Groups Add/Edit Cut-points Kelli L. Cain, San Diego May 2014

Strany 11 - Tracking:

Filename variables (Tools/options) Enter sample file name (ADD) Designate character positions Name your variables Kelli L. Cain, San Diego May 2014

Strany 12

Settings for bouts (Tools/Options) Moderate activity lower threshold cut-point for adults (Freedson) for 60s epoch Moderate activity upper threshold c

Strany 13 - PART 2: PRE-DATA COLLECTION

IPEN Adolescent Accelerometer Data Collection Guidelines  Tracking:  IMPORTANT: Record researcher days (i.e., drop off days, pick-up days) so they

Strany 14

Energy expenditure (Tools/Options) Choice of 3 algorithms Kelli L. Cain, San Diego May 2014

Strany 15 - ActiGraph GT3X

Time filters (Tools/Options) Select days of the week & times per day (e.g., after-school hours) to summarize activity. Kelli L. Cain, San Diego Ma

Strany 16 - ActiGraph GT3X+

Age and weight files (Reports/Scoring) Link to subject age and body weight files to use age-defined cut-points within the same batch (i.e., age-specif

Strany 17

Batch scoring (Reports/Scoring) One step Create Where to save processed CSV file for entire sample Where to find individual files to proc

Strany 18 - DO NOT tell participants

Output File type Description CSV Comma-delimited file containing the results of the batch scoring including activity counts, step counts, bouts and

Strany 19

Activity, Bouts, EE variables Energy Expenditure Bouts Activity Serial number, start date, # valid days & hours, number of epochs in each activit

Strany 20 - What do you need?

Output: Activity variables Start date, number of valid days, number of valid hours, and number of epochs in each activity category across all valid da

Strany 21

Output: Bouts variables Number of bouts, total and average length of bouts, start and end times of each bout. A. D1_bout_num = 1 bout of activity in

Strany 22 - Determining Inventory Needs

Output: Energy expenditure variables Total caloric expenditure, mean caloric expenditure, peak caloric expenditure and caloric expenditure in each act

Strany 23 - Device Inventory Form

Output: Time-filtered variables Activity counts during each defined time period, within each activity category, for each day of data. A A. D1T1_m

Strany 24 - Staffing

IPEN Adolescent Accelerometer Data Collection Guidelines  Major holidays and school breaks:  Activity patterns tend to be different during major hol

Strany 25

 About the Actigraph  Preparing for Data Collection  Charging, Initializing, & Delivering  Compliance Tips and Prompting  Tracking PART 2:

Strany 26 - Stages of Actigraph

How the accelerometer determines PA intensity  It contains a motion sensor known as an “accelerometer” that monitors the occurrence and degree of mo

Strany 27 - Charging

 Can collect data in 1, 2, or 3 planes of movement (vertical, horizontal and medial-lateral) – however, for IPEN we will only use the vertical axis.

Strany 28

Same as the GT3X except…  Collects raw data and epoch and filter are applied when downloading  Lithium battery lasts about 30 days before needing to

Strany 29 - Initializing

 It records overall movement, much like a pedometer  It’s harmless – it runs on a battery, like your watch  There isn’t an ‘on’ and ‘off’ switch

Strany 30

 The accelerometer will tell us how much you exercise, walk, jog, etc.  Make sure to move a lot while you’re wearing the device!  You live in a wal

Strany 31

 About the Actigraph  Preparing for Data Collection  Charging, Initializing, & Delivering  Compliance Tips and Prompting  Tracking PART 2:

Strany 32 - Initializing GT3X+

Overview Kelli L. Cain, San Diego May 2014 PART 1: OVERVIEW FOR EVERYONE  Coordinating Center Roles  IPEN Adolescent Accelerometer Data Collection G

Strany 33 - Initializing GT3X

What do you need? Kelli L. Cain, San Diego May 2014  Actigraphs  Label each device  Inventory in database  Price = $250 each  Charging hub  N

Strany 34 - Only field that is required

What do you need? Kelli L. Cain, San Diego May 2014  Actilife  initialize, download and create graphs  Price = $995  www.theactigraph.com  Mete

Strany 35 - 86_200600

Determining Inventory Needs  A 7-day wear ties up 1 device for 11-14 days 1 day prep + 1 pre-wear day + 7 day wear + 1-4 post wear days +1 day

Strany 36

Device Inventory Form Kelli L. Cain, San Diego May 2014

Strany 37 - Data screening in the field

Staffing  At least a 50% FTE will be needed to manage the equipment initialization and downloading (can include prompt calling)  At least a 50% FTE

Strany 38 - Call with any questions

 About the Actigraph  Preparing for Data Collection  Charging, Initializing, & Delivering  Compliance Tips and Prompting  Tracking PART

Strany 39

2. Initialize Initialize device to begin collecting data using the Actilife software 5.Enough time? Decide if enough valid data has been coll

Strany 40 - Over or under clothing

Charging  Storage capacity exceeds battery life, so getting a unit charged is ALWAYS the primary concern  Charging (& downloading) is done via

Strany 41

2. Initialize Initialize device to begin collecting data using the Actilife software 5.Enough time? Decide if enough valid data has been coll

Strany 42 - Compliance Elements

Initializing  The ActiLife software & drivers must be installed on any computer on which ActiGraph initialization and/or downloading will occur

Strany 43

Coordinating Center Roles  Provide Training & Materials  Training slides and Manual  Tracking database  Wearing log and instructions  http://

Strany 44 - Instructions

Memory and Battery Considerations Kelli L. Cain, San Diego May 2014 Raw Data GT3X+ (256MB) GT3X+ (512MB) Sample Rate (Hz) Battery Life (Days) Memory L

Strany 45

Initializing Kelli L. Cain, San Diego May 2014 Don’t set start date too early, will use up battery. Try for the first full day of participant wearing.

Strany 46 - Prompting Material Return

Initializing GT3X+ Kelli L. Cain, San Diego May 2014 1. Select 30 Hz 2. Enable Idle Sleep Mode (ONLY if you need to save battery). Devices will enter

Strany 47 - Prompt Calls

Initializing GT3X Kelli L. Cain, San Diego May 2014 1. Select 30sec Epochs or shorter if you have enough memory 2. Number of Axis= 3 3. Select Low Fr

Strany 48 - Call Schedule

Only field that is required Use File naming convention Kelli L. Cain, San Diego May 2014  The accelerometer filename is the only way the Coordina

Strany 49

IPEN file naming convention  IPEN will use a consistent file naming convention to identify all accelerometer files  It is required that this file n

Strany 50 - Letter for teachers, coaches

Initializing Kelli L. Cain, San Diego May 2014 You’re done!

Strany 51 - Stickers, Incentives

Logistics for in-person delivery  Linking Actigraph serial number to participant in the field  In field assign serial # to participant ID #  Make s

Strany 52

Delivery of Actigraph: Talking Points Kelli L. Cain, San Diego May 2014 How to wear the meter  Wear for 7 complete days  Wear for all waking hours –

Strany 53

Delivery of Actigraph: Checklist Kelli L. Cain, San Diego May 2014  Make link between device serial number and participant  Show participant the gra

Strany 54 - Access Tracking Database

IPEN Adolescent Accelerometer Data Collection Guidelines  Accelerometer Model  Data Filter  Epoch  Nonwear definition  Valid Wearing Day definit

Strany 55 - Tracking Outgoing Devices

Attaching the Belt & Wear position  Suggest several different size belts (30”, 40”, 50” – ask participant which size they want)  Take off one ha

Strany 56 - Track Recruitment and Visits

 About the Actigraph  Preparing for Data Collection  Charging, Initializing, & Delivering  Compliance Tips and Prompting  Tracking PART 2:

Strany 57

Compliance Elements  Graphs  Instruction sheets with dates  Wearing log  Calls/Emails/Texts/Mailings– new studies coming out showing that texting

Strany 58 - NEED TO STRETCH? EAT???

Graphs USE GRAPHS at device drop off “We can see if you don’t wear the device for long enough” “We will need to ask you to wear it again” Kell

Strany 59

Instructions • How to wear meter • Increase valid wearing time expectations • Provides an end date Kelli L. Cain, San Diego May 2014

Strany 60

Kelli L. Cain, San Diego May 2014 Log • Provides a daily assignment that might serve as a wearing reminder • Can be helpful when processing data

Strany 61 - Downloading data from GT3X

Phone calls Prompting Material Return Emails/Text Messages Mailings/Visits • First calls at the beginning of wearing to remind of criteria and proper

Strany 62 - Downloading data from GT3X+

Prompt Calls  Calls made on Days 2 and 5 (text/email if don’t reach participant)  Reminder to wear  Check if on schedule  Troubleshoot problems o

Strany 63 - AGD to DAT

Call Schedule Kelli L. Cain, San Diego May 2014 Action (MC=meter check-in call; MR=meter reminder call; PC=prompt call) Length of time before next con

Strany 64 - DAT use the DAT converter to

Scheduling and tips for weekend compliance Kelli L. Cain, San Diego May 2014  Lower compliance on weekends, so recommend starting toward the end of

Strany 65 - Raw to AGD (GT3X+ only)

IPEN Adolescent Accelerometer Data Collection Guidelines  Accelerometer Model:  Any of the following ActiGraph models are fine: 7164/71256, GT1M, G

Strany 66 - Actilife

Letter for teachers, coaches Kelli L. Cain, San Diego May 2014  Explains accelerometer and study  May help reduce device removals for school,

Strany 67

Stickers, Incentives Kelli L. Cain, San Diego May 2014  Stickers of popular music/sports figures wearing ActiGraphs were a hit with young kids… but

Strany 68 - Need dedicated staff person

Delivery and Compliance Training  Data collectors wear Actigraph for several days so they can speak from experience  Role playing for delivery of A

Strany 69

 About the Actigraph  Preparing for Data Collection  Charging, Initializing, & Delivering  Compliance Tips and Prompting  Tracking PART 2:

Strany 70 - Screening data – Open file

Access Tracking Database  Two functions: Track devices and track people  Device (tracking & inventory) form to track dates, wearing time, hist

Strany 71 - MIDNIGHT

Tracking Outgoing Devices Kelli L. Cain, San Diego May 2014

Strany 72 - (WEARING)

Track Recruitment and Visits Kelli L. Cain, San Diego May 2014

Strany 73 - Examples of data

Track data collection and prompts Kelli L. Cain, San Diego May 2014

Strany 74 - Mail day

PART 2 COMPLETED! NEED TO STRETCH? EAT??? Kelli L. Cain, San Diego May 2014

Strany 75

 Downloading and Converting Data  Screening Data  Electronic Tracking  Data Transfer  Quality Control PART 3: POST-DATA COLLECTION Kelli L. Cai

Strany 76 - Typical wearing day

IPEN Adolescent Accelerometer Data Collection Guidelines  Filter:  MUST USE the Low Frequency Extension with new generation Actigraphs (GT1M, ActiT

Strany 77 - DOCUMENTED WEAR DATES

2. Initialize Initialize device to begin collecting data using the Actilife software 5.Enough time? Decide if enough valid data has been coll

Strany 78 - Shift worker - SAVE

Downloading data from GT3X Kelli L. Cain, San Diego May 2014 Use IPEN file naming convention

Strany 79 - Midnight

Downloading data from GT3X+ Kelli L. Cain, San Diego May 2014 Use IPEN file naming convention Create AGD file Epoch = 30s 3 axis Check all download op

Strany 80 - Non-wearing day

AGD to DAT Epoch to epoch Kelli L. Cain, San Diego May 2014 Make sure you don’t select Data Table (CSV)

Strany 81

DAT to CSV Kelli L. Cain, San Diego May 2014 After converting an AGD file to DAT use the DAT converter to create a CSV file

Strany 82 - Red flag – 24 valid hours

 c Raw to AGD (GT3X+ only) Kelli L. Cain, San Diego May 2014 NOTE: you can go back and re-create the AGD file from the raw data file as many time

Strany 83 - Device is likely

File Conversions – Actilife to MeterPlus Kelli L. Cain, San Diego May 2014 ActiLife (raw) GT3X file Actilife (epoch/

Strany 84 - Other strange data patterns

2. Initialize Initialize device to begin collecting data using the Actilife software 5.Enough time? Decide if enough valid data has been coll

Strany 85

Data screening  Looking for valid wear time & device malfunction  Invalid days and non wear days are not always obvious, screening catches

Strany 86 - Rewear Decision

Screening data – Program Settings Kelli L. Cain, San Diego May 2014

Strany 87 - Rewear delivery

IPEN Adolescent Accelerometer Data Collection Guidelines  Epoch:  Recommendation is to collect data with the shortest epoch your memory/battery wil

Strany 88

Screening data – Open file 2. Data displayed in list format 3. Click day open for detailed view of epoch-level data 1. Drag and drop file here 01_10

Strany 89

One line is ALWAYS 1 hr Top left cell is ALWAYS MIDNIGHT 9pm One column is ALWAYS 1 epoch (in this case 30s) • 1 min epoch: 60 data points per hour

Strany 90

WHY LOOK AT EPOCH-LEVEL DATA? Can’t distinguish between wear and nonwear days from the list view 13 hours (NONWEAR) 13 hours (WEARING) Kelli L. Cain,

Strany 91 - Log Entry form

Examples of data  Wearing time that matches documentation of wear dates – SAVE  Wearing time that is outside of documented wear dates – MAY SAVE OR

Strany 92 - School Times Entry form

Wearing time, matches wear dates -SAVE Wearing days Mail day Wearing time looks straight forward. Use log to match up days AND do a manual check of e

Strany 93

Saving wear time You select the days to be scored based on documented wear dates and your observations of the data Kelli L. Cain, San Diego May 2014

Strany 94 - Tracking rewear

Typical wearing day This is a typical wearing day. There are rows of zero counts during sleep and the activity starts at the 7th row, or 7am. There ar

Strany 95

Wearing time, doesn’t match wear dates – ONLY SAVE DOCUMENTED WEAR DATES Observed wearing days Documented wearing days Mail days Wearing time is NOT

Strany 96 - Data Transfer

Shift worker - SAVE Kelli L. Cain, San Diego May 2014

Strany 97

Overnight wearing Midnight Low counts of activity (typically <500 per minute) recorded overnight indicating the meter was worn during sleep. Flag t

Strany 98 -  Database Management

IPEN Adolescent Accelerometer Data Collection Guidelines  Nonwear definition:  Recommendation is 60 minutes of consecutive 0’s to define nonwear ti

Strany 99 - Certification

Non-wearing day This day has 9 valid hours but is NOT wearing time. There are a lot of zero counts and low values. The counts are sporadic and do not

Strany 100 -  Electronic Tracking

Non-wearing day (mail day)– DO NOT SAVE This day is found in between wearing days and has 10 valid hours but is NOT wearing time. There are a lot of z

Strany 101 - Data Scoring

Red flag – 24 valid hours Unlikely pattern Kelli L. Cain, San Diego May 2014

Strany 102 - Program

Red flag – stops recording after 5 days This wouldn’t happen if battery was fully charged. Device is likely defective. Kelli L. Cain, San Diego May 20

Strany 103 - Saving wear time

Examples of invalid data (device malfunction) Constant, repeating number Counts >16,000, don’t have to fill entire day Other strange data patterns

Strany 104 - Pointers

2. Initialize Initialize device to begin collecting data using the Actilife software 5.Enough time? Decide if enough valid data has been coll

Strany 105 - Combining re-wear files

Rewear Decision 5 valid or more days (incl one 8 hr weekend) with 10+ valid hours? Are there any wearing days? Done, no rewear requested Contact part

Strany 106 -  Time Filters

Rewears (sample script in manual)  Data manager will make decision if rewear is needed  Ask participant for rewear  Reminder that re-wear is part o

Strany 107 - Add/Edit Cut-points

 Downloading Data  Screening Data  Electronic Tracking  Data Transfer  Quality Control PART 3: POST-DATA COLLECTION Kelli L. Cain, San Diego Ma

Strany 108 - (Tools/options)

Tracking Incoming Devices and Wear Time Screening Kelli L. Cain, San Diego May 2014

Strany 109

IPEN Adolescent Accelerometer Data Collection Guidelines  Valid Wearing Day definition:  Weekday: 10 wearing hours (commonly used and based on a

Strany 110 - Choice of 3

Tracking Data Problems, Time Out and Device Loss Kelli L. Cain, San Diego May 2014

Strany 111 - Time filters (Tools/Options)

Log Entry form Kelli L. Cain, San Diego May 2014

Strany 112

School Times Entry form Kelli L. Cain, San Diego May 2014

Strany 113 - One step Create

Track data collection and prompts Kelli L. Cain, San Diego May 2014

Strany 114 - File type Description

Tracking rewear  Track rewears in participant database  Remember to add a new record to meter tracking database for all re-wears  Stage (1=1st wear

Strany 115 - Activity

 Downloading Data  Screening Data  Electronic Tracking  Data Transfer  Quality Control PART 3: POST-DATA COLLECTION Kelli L. Cain, San Diego Ma

Strany 116 - Output: Activity variables

Data Transfer  Weekly transfer of all accelerometer files to IPEN-CC  Send CSV files that you used for screening (not AGD files)  30 second epoch 

Strany 117 - Output: Bouts variables

 Downloading Data  Screening Data  Electronic Tracking  Data Transfer  Quality Control PART 3: POST-DATA COLLECTION Kelli L. Cain, San Diego M

Strany 118

Quality Control  Actigraph Data Screening Checking  Ideally, same person would screen all the data  Regular reliability checks should be conducted

Strany 119

Certification  Certification materials available  Re-train if necessary and try again  Can give conditional certification, meaning you will check m

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